液-液相分离的发生机制及其在肿瘤进展中的关键作用

陈宣儒 ,  王天卓 ,  林佳杰 ,  刘喆

杭州师范大学学报(自然科学版) ›› 2026, Vol. 25 ›› Issue (3) : 257 -267.

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杭州师范大学学报(自然科学版) ›› 2026, Vol. 25 ›› Issue (3) : 257 -267. DOI: 10.19926/j.cnki.issn.1674-232X.2025.01.222
医学与药学

液-液相分离的发生机制及其在肿瘤进展中的关键作用

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Mechanism of liquid-liquid phase separation and its key role in tumor progression

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摘要

液-液相分离(liquid-liquid phase separation,LLPS)可以驱动细胞内蛋白质和核酸等生物大分子自发聚集,形成具有液态特性的生物分子凝聚体(biomolecular condensate,BMC)即无膜细胞器(membrane-less organelle,MLO).研究发现,关键蛋白的LLPS形成、调控及异常与肿瘤的发生、发展、转移及血管生成等过程密切相关.文章系统综述了LLPS的发生机制,并探讨了其在肿瘤进展不同阶段中的作用,以期为通过干预关键蛋白的LLPS治疗恶性肿瘤提供理论依据.

Abstract

Liquid-liquid phase separation (LLPS) can drive the spontaneous aggregation of biomacromolecules such as proteins and nucleic acids within cells, forming biomolecular condensate (BMC) with liquid-like properties, also known as membrane-less organelle (MLO). Studies have found that the formation, regulation, and dysregulation of LLPS of key proteins are closely related to processes such as tumor initiation, progression, metastasis, and angiogenesis. This article systematically reviews the mechanism of LLPS and discusses its role at different stages of tumor development, aiming to provide a theoretical basis for treating malignant tumors by targeting the LLPS of key proteins.

关键词

无膜细胞器 / 液-液相分离 / 内在无序区域 / 肿瘤

Key words

membrane-less organelle / liquid-liquid phase separation / intrinsically disordered region / tumor

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陈宣儒,王天卓,林佳杰,刘喆. 液-液相分离的发生机制及其在肿瘤进展中的关键作用[J]. 杭州师范大学学报(自然科学版), 2026, 25(3): 257-267 DOI:10.19926/j.cnki.issn.1674-232X.2025.01.222

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参考文献

[1]

BRANGWYNNE C P, ECKMANN C R, COURSON D S, et al. Germline P granules are liquid droplets that localize by controlled dissolution/condensation[J]. Science, 2009, 324(5935): 1729-1732.

[2]

CHOI J M, HOLEHOUSE A S, PAPPU R V. Physical principles underlying the complex biology of intracellular phase transitions[J]. Annual Review of Biophysics, 2020, 49: 107-133.

[3]

TONG X H, TANG R, XU J, et al. Liquid-liquid phase separation in tumor biology[J]. Signal Transduction and Targeted Therapy, 2022, 7: 221.

[4]

SHIN Y, BRANGWYNNE C P. Liquid phase condensation in cell physiology and disease[J]. Science, 2017, 357(6357): eaaf4382.

[5]

MEHTA S, ZHANG J. Liquid-liquid phase separation drives cellular function and dysfunction in cancer[J]. Nature Reviews Cancer, 2022, 22(4): 239-252.

[6]

NOZAWA R S, YAMAMOTO T, TAKAHASHI M, et al. Nuclear microenvironment in cancer: control through liquid-liquid phase separation[J]. Cancer Science, 2020, 111(9): 3155-3163.

[7]

UVERSKY V N. Intrinsically disordered proteins in overcrowded milieu: membrane-less organelles, phase separation, and intrinsic disorder[J]. Current Opinion in Structural Biology, 2017, 44: 18-30.

[8]

ALBERTI S, GLADFELTER A, MITTAG T. Considerations and challenges in studying liquid-liquid phase separation and biomolecular condensates[J]. Cell, 2019, 176(3): 419-434.

[9]

BANANI S F, LEE H O, HYMAN A A, et al. Biomolecular condensates: organizers of cellular biochemistry[J]. Nature Reviews Molecular Cell Biology, 2017, 18(5): 285-298.

[10]

STADERINI B, BIGI A, LAGRÈVE C, et al. Biophysical characterization of the phase separation of TDP-43 devoid of the C-terminal domain[J]. Cellular & Molecular Biology Letters, 2024, 29(1): 104.

[11]

PATEL A, MALINOVSKA L, SAHA S, et al. ATP as a biological hydrotrope[J]. Science, 2017, 356(6339): 753-756.

[12]

REKHI S, GARCIA C G, BARAI M, et al. Expanding the molecular language of protein liquid-liquid phase separation[J]. Nature Chemistry, 2024, 16(7): 1113-1124.

[13]

KANG J Y, WEN Z, PAN D, et al. LLPS of FXR1 drives spermiogenesis by activating translation of stored mRNAs[J]. Science, 2022, 377(6607): eabj6647.

[14]

MOLLIEX A, TEMIROV J, LEE J H, et al. Phase separation by low complexity domains promotes stress granule assembly and drives pathological fibrillization[J]. Cell, 2015, 163(1): 123-133.

[15]

KRAINER G, WELSH T J, JOSEPH J A, et al. Reentrant liquid condensate phase of proteins is stabilized by hydrophobic and non-ionic interactions[J]. Nature Communications, 2021, 12: 1085.

[16]

CASE L B, ZHANG X, DITLEV J A, et al. Stoichiometry controls activity of phase-separated clusters of actin signaling proteins[J]. Science, 2019, 363(6431): 1093-1097.

[17]

LI P, BANJADE S, CHENG H C, et al. Phase transitions in the assembly of multivalent signalling proteins[J]. Nature, 2012, 483(7389): 336-340.

[18]

XUE B, DUNKER A K, UVERSKY V N. Orderly order in protein intrinsic disorder distribution: disorder in 3500 proteomes from viruses and the three domains of life[J]. Journal of Biomolecular Structure and Dynamics, 2012, 30(2): 137-149.

[19]

PESSINA F, GIOIA U, BRANDI O, et al. DNA damage triggers a new phase in neurodegeneration[J]. Trends in Genetics, 2021, 37(4): 337-354.

[20]

BORCHERDS W, BREMER A, BORGIA M B, et al. How do intrinsically disordered protein regions encode a driving force for liquid-liquid phase separation?[J]. Current Opinion in Structural Biology, 2021, 67: 41-50.

[21]

LIN Y, CURRIE S L, ROSEN M K. Intrinsically disordered sequences enable modulation of protein phase separation through distributed tyrosine motifs[J]. Journal of Biological Chemistry, 2017, 292(46): 19110-19120.

[22]

WANG J, CHOI J M, HOLEHOUSE A S, et al. A molecular grammar governing the driving forces for phase separation of prion-like RNA binding proteins[J]. Cell, 2018, 174(3): 688-699.

[23]

LU Y, WU T T, GUTMAN O, et al. Phase separation of TAZ compartmentalizes the transcription machinery to promote gene expression[J]. Nature Cell Biology, 2020, 22(4): 453-464.

[24]

CONICELLA A E, ZERZE G H, MITTAL J, et al. ALS mutations disrupt phase separation mediated by α-helical structure in the TDP-43 low-complexity C-terminal domain[J]. Structure, 2016, 24(9): 1537-1549.

[25]

LIN Y X, FICHOU Y, LONGHINI A P, et al. Liquid-liquid phase separation of tau driven by hydrophobic interaction facilitates fibrillization of tau[J]. Journal of Molecular Biology, 2021, 433(2): 166731.

[26]

VIEREGG J R, LUECKHEIDE M, MARCIEL A B, et al. Oligonucleotide-peptide complexes: phase control by hybridization[J]. Journal of the American Chemical Society, 2018, 140(5): 1632-1638.

[27]

JAIN A, VALDE R. RNA phase transitions in repeat expansion disorders[J]. Nature, 2017, 546(7657): 243-247.

[28]

RIES R J, ZACCARA S, KLEIN P, et al. m 6A enhances the phase separation potential of mRNA [J]. Nature, 2019, 571(7765): 424-428.

[29]

KATO M, HAN T W, XIE S H, et al. Cell-free formation of RNA granules: low complexity sequence domains form dynamic fibers within hydrogels[J]. Cell, 2012, 149(4): 753-767.

[30]

FOX A H, NAKAGAWA S, HIROSE T, et al. Paraspeckles: where long noncoding RNA meets phase separation[J]. Trends in Biochemical Sciences, 2018, 43(2): 124-135.

[31]

BIENZ M. Head-to-tail polymerization in the assembly of biomolecular condensates[J]. Cell, 2020, 182(4): 799-811.

[32]

HUANG S A, MISHINA Y M, LIU S M, et al. Tankyrase inhibition stabilizes axin and antagonizes Wnt signalling[J]. Nature, 2009, 461(7264): 614-620.

[33]

CHANDRA B, MICHMERHUIZEN N L, SHIRNEKHI H K, et al. Phase separation mediates NUP98 fusion oncoprotein leukemic transformation[J]. Cancer Discovery, 2022, 12(4): 1152-1169.

[34]

QIN Z, SUN H H, YUE M T, et al. Phase separation of EML4-ALK in firing downstream signaling and promoting lung tumorigenesis[J]. Cell Discovery, 2021, 7: 33.

[35]

FAWAL M, ESPINOS E, JEAN-JEAN O, et al. Looking for the functions of RNA granules in ALK-transformed cells[J]. BioArchitecture, 2011, 1(2): 91-95.

[36]

WEATHERITT R J, LUCK K, PETSAKI E, et al. The identification of short linear motif-mediated interfaces within the human interactome[J]. Bioinformatics, 2012, 28(7): 976-982.

[37]

TOMPA P, FUXREITER M, OLDFIELD C J, et al. Close encounters of the third kind: disordered domains and the interactions of proteins[J]. BioEssays, 2009, 31(3): 328-335.

[38]

XIANG S H, KATO M, WU L C, et al. The LC domain of hnRNPA2 adopts similar conformations in hydrogel polymers, liquid-like droplets, and nuclei[J]. Cell, 2015, 163(4): 829-839.

[39]

WINTER R. Temperature, pressure, and cosolute effects on liquid-liquid phase separation in protein condensates: physical chemistry and biological implications[J]. Biophysical Journal, 2021, 120(3): 99a.

[40]

PHILIPP J , DABKOWSKA A , REISER A , et al. pH-dependent structural transitions in cationic ionizable lipid mesophases are critical for lipid nanoparticle function[J]. Proceedings of the National Academy of Sciences of the United States of America, 2023, 120(50): e2310491120.

[41]

GANAR K, NANDY M, TURBINA P, et al. Phase separation and ageing of Glycine-rich protein from tick adhesive[J]. Nature Chemistry, 2025, 17(2): 186-197.

[42]

KENGMAN E, ORNELAS-GATDULA E, CHEN K L, et al. Spatial control over reactions via localized transcription within membraneless DNA nanostar droplets[J]. Journal of the American Chemical Society, 2024, 146(48): 32942-32952.

[43]

O'FLYNN B G, MITTAG T. The role of liquid-liquid phase separation in regulating enzyme activity[J]. Current Opinion in Cell Biology, 2021, 69: 70-79.

[44]

GAO Y F, PEI G F, LI D X, et al. Multivalent m 6A motifs promote phase separation of YTHDF proteins [J]. Cell Research, 2019, 29(9): 767-769.

[45]

CHENG Y M, XIE W, PICKERING B F, et al. N6-methyladenosine on mRNA facilitates a phase-separated nuclear body that suppresses myeloid leukemic differentiation[J]. Cancer Cell, 2021, 39(7): 958-972.

[46]

CAI D F, LIU Z, LIPPINCOTT-SCHWARTZ J. Biomolecular condensates and their links to cancer progression[J]. Trends in Biochemical Sciences, 2021, 46(7): 535-549.

[47]

WANG G G, CAI L, PASILLAS M P, et al. NUP98-NSD1 links H3K36 methylation to Hox-A gene activation and leukaemogenesis[J]. Nature Cell Biology, 2007, 9(7): 804-812.

[48]

HANAHAN D, WEINBERG R A. Hallmarks of cancer: the next generation[J]. Cell, 2011, 144(5): 646-674.

[49]

CLARK A, BURLESON M. SPOP and cancer: a systematic review[J]. American Journal of Cancer Research, 2020, 10(3): 704-726.

[50]

GHODKE I, REMISOVA M, FURST A, et al. AHNAK controls 53BP1-mediated p53 response by restraining 53BP1 oligomerization and phase separation[J]. Molecular Cell, 2021, 81(12): 2596-2610.

[51]

MASSAGUÉ J. TGFβ in cancer[J]. Cell, 2008, 134(2): 215-230.

[52]

HIGASHIMOTO Y, ASANO M I Y, TAKAKUSAGI S, et al. Unfolding, aggregation, and amyloid formation by the tetramerization domain from mutant p53 associated with lung cancer[J]. Biochemistry, 2006, 45(6): 1608-1619.

[53]

ZONG Z, XIE F, WANG S, et al. Alanyl-tRNA synthetase, AARS1, is a lactate sensor and lactyltransferase that lactylates p53 and contributes to tumorigenesis[J]. Cell, 2024, 187(10): 2375-2392.

[54]

ODA T, GOTOH N, KASAMATSU T, et al. DNA damage-induced cellular senescence is regulated by 53BP1 accumulation in the nuclear foci and phase separation[J]. Cell Proliferation, 2023, 56(6): e13398.

[55]

GREIDER C W. Telomere length regulation[J]. Annual Review of Biochemistry, 1996, 65: 337-365.

[56]

MIN J, WRIGHT W E, SHAY J W. Clustered telomeres in phase-separated nuclear condensates engage mitotic DNA synthesis through BLM and RAD52[J]. Genes & Development, 2019, 33(13/14): 814-827.

[57]

ODA Y, SAKAMOTO A, SHINOHARA N, et al. Nuclear expression of YB-1 protein correlates with P-glycoprotein expression in human osteosarcoma[J]. Clinical Cancer Research, 1998, 4(9): 2273-2277.

[58]

SOMASEKHARAN S P, SAXENA N, ZHANG F, et al. Regulation of AR mRNA translation in response to acute AR pathway inhibition[J]. Nucleic Acids Research, 2022, 50(2): 1069-1091.

[59]

MA G F, ZHANG Z L, LI P, et al. Reprogramming of glutamine metabolism and its impact on immune response in the tumor microenvironment[J]. Cell Communication and Signaling, 2022, 20(1): 114.

[60]

YUNEVA M, ZAMBONI N, OEFNER P, et al. Deficiency in glutamine but not glucose induces MYC-dependent apoptosis in human cells[J]. The Journal of Cell Biology, 2007, 178(1): 93-105.

[61]

WANG R J, CAO L X, THORNE R F, et al. LncRNA GIRGL drives CAPRIN1-mediated phase separation to suppress glutaminase-1 translation under glutamine deprivation [J]. Science Advances, 2021, 7(13): eabe5708.

[62]

SU X L, DITLEV J A, HUI E F, et al. Phase separation of signaling molecules promotes T cell receptor signal transduction[J]. Science, 2016, 352(6285): 595-599.

[63]

HUANG W Y C, ALVAREZ S, KONDO Y, et al. A molecular assembly phase transition and kinetic proofreading modulate Ras activation by SOS[J]. Science, 2019, 363(6431): 1098-1103.

[64]

HUANG W Y C, YAN Q R, LIN W C, et al. Phosphotyrosine-mediated LAT assembly on membranes drives kinetic bifurcation in recruitment dynamics of the Ras activator SOS[J]. Proceedings of the National Academy of Sciences of the United States of America, 2016, 113(29): 8218-8223.

[65]

YAMAZAKI T, ZAAL K, HAILEY D, et al. Role of GRB2 in EGF-stimulated EGFR internalization[J]. Journal of Cell Science, 2002, 115(9): 1791-1802.

[66]

TULPULE A, GUAN J, NEELD S, et al. Kinase-mediated RAS signaling via membraneless cytoplasmic protein granules[J]. Cell, 2021, 184(10): 2649-2664.

[67]

LIN C C, SUEN K M, LIDSTER J, et al. The emerging role of receptor tyrosine kinase phase separation in cancer[J]. Trends in Cell Biology, 2024, 34(5): 371-379.

[68]

LIU S Y, LIN C L, LIN X, et al. NAT10 phase separation regulates YTHDF1 splicing to promote gastric cancer progression[J]. Cancer Research, 2024, 84(19): 3207-3222.

[69]

BANYARD J, BIELENBERG D R. The role of EMT and MET in cancer dissemination[J]. Connective Tissue Research, 2015, 56(5): 403-413.

[70]

CORDENONSI M, ZANCONATO F, AZZOLIN L, et al. The hippo transducer TAZ confers cancer stem cell-related traits on breast cancer cells[J]. Cell, 2011, 147(4): 759-772.

[71]

ZANCONATO F, CORDENONSI M, PICCOLO S. YAP/TAZ at the roots of cancer[J]. Cancer Cell, 2016, 29(6): 783-803.

[72]

KIANG K M, AHAD L, ZHONG X W, et al. Biomolecular condensates: hubs of Hippo-YAP/TAZ signaling in cancer[J]. Trends in Cell Biology, 2024, 34(7): 566-577.

[73]

GAO H B, WEI H T, YANG Y, et al. Phase separation of DDX21 promotes colorectal cancer metastasis via MCM5-dependent EMT pathway[J]. Oncogene, 2023, 42(21): 1704-1715.

[74]

WANG Y, FU D H, CHEN Y J, et al. G3BP1 promotes tumor progression and metastasis through IL-6/G3BP1/STAT3 signaling axis in renal cell carcinomas[J]. Cell Death & Disease, 2018, 9: 501.

[75]

TANIUCHI K, NISHIMORI I, HOLLINGSWORTH M A. The N-terminal domain of G3BP enhances cell motility and invasion by posttranscriptional regulation of BART[J]. Molecular Cancer Research, 2011, 9(7): 856-866.

[76]

HANAHAN D. Hallmarks of cancer: new dimensions[J]. Cancer Discovery, 2022, 12(1): 31-46.

[77]

NAKAMURA T, HIPPE C, SANTOS DIAS MOURÃO A, et al. Phase separation of FSP1 promotes ferroptosis[J]. Nature, 2023, 619(7969): 371-377.

[78]

WOO S R, FUERTES M B, CORRAL L, et al. STING-dependent cytosolic DNA sensing mediates innate immune recognition of immunogenic tumors[J]. Immunity, 2014, 41(5): 830-842.

[79]

DENG L F, LIANG H, XU M, et al. STING-dependent cytosolic DNA sensing promotes radiation-induced type Ⅰ interferon-dependent antitumor immunity in immunogenic tumors[J]. Immunity, 2014, 41(5): 843-852.

[80]

MENG F S, YU Z Y, ZHANG D, et al. Induced phase separation of mutant NF2 imprisons the cGAS-STING machinery to abrogate antitumor immunity[J]. Molecular Cell, 2021, 81(20): 4147-4164.e7.

[81]

XIE F, ZHOU X X, RAN Y, et al. Targeting FOXM1 condensates reduces breast tumour growth and metastasis[J]. Nature, 2025, 638(8052): 1112-1121.

[82]

GRIVENNIKOV S I, GRETEN F R, KARIN M. Immunity, inflammation, and cancer[J]. Cell, 2010, 140(6): 883-899.

[83]

NIWA-KAWAKITA M, FERHI O, SOILIHI H, et al. PML is a ROS sensor activating p53 upon oxidative stress[J]. Journal of Experimental Medicine, 2017, 214(11): 3197-3206.

[84]

PENG Q, WANG L J, QIN Z L, et al. Phase separation of Epstein-Barr virus EBNA2 and its coactivator EBNALP controls gene expression[J/OL]. Journal of Virology, 2020, 94(7). [2025-01-10]. https://doi.org/10.1128/jvi.01771-19.

[85]

BERGERS G, BENJAMIN L E. Tumorigenesis and the angiogenic switch[J]. Nature Reviews Cancer, 2003, 3(6): 401-410.

[86]

BAUDINO T A, MCKAY C, PENDEVILLE-SAMAIN H, et al. C-MYC is essential for vasculogenesis and angiogenesis during development and tumor progression[J]. Genes & Development, 2002, 16(19): 2530-2543.

[87]

JIANG Y Y, LEI G Y, LIN T, et al. 1,6-Hexanediol regulates angiogenesis via suppression of cyclin A1-mediated endothelial function[J]. BMC Biology, 2023, 21(1): 75.

[88]

LU B, QIU R, WEI J T, et al. Phase separation of phospho-HDAC6 drives aberrant chromatin architecture in triple-negative breast cancer[J]. Nature Cancer, 2024, 5(11): 1622-1640.

[89]

HUANG X, MA Z M, HE D X, et al. Molecular condensation of the CO/NF-YB/NF-YC/FT complex gates floral transition in Arabidopsis[J]. The EMBO Journal, 2025, 44(1): 225-250.

基金资助

国家自然科学基金青年基金项目(82303403)

浙江省自然科学基金探索项目(LMS26H160021)

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